Software
A fundamental part of our mission as a computationally-oriented research group consists of implementing the developed statistical and bioinformatic methods into publicly available open-source software. We do it by means of software packages that run on top of the R platform and contributing these packages to the Bioconductor project.
| qpgraph | Estimate gene and eQTL networks from high-throughput expression and genotyping assays. | |
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GenomicScores
-> web service |
Provide infrastructure to store and access genomewide position-specific scores within R and Bioconductor. | |
| VariantFiltering | Filter genetic variants using different criteria. | |
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GSVA
-> web service |
Estimate variation in gene set enrichment through the samples of an expression data set. Jointly developed with Justin Guinney from Sage Bionetworks. |
